Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 AL591424.1-201ENST00000442569 1213 ntBASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 AC105339.3-201ENST00000560043 636 ntBASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 AP002414.3-201ENST00000589352 1468 ntBASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX11Q9Y5W9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 KRT18P3-201ENST00000451602 1288 ntBASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 AP000867.4-201ENST00000641616 219 ntBASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 AC107918.4-202ENST00000641623 219 ntBASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX11Q9Y5W9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 UPF3AP3-201ENST00000420996 769 ntBASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms