Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AC079776.4-201ENST00000511039 504 ntBASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AC023511.2-201ENST00000618803 211 ntBASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AC008894.3-201ENST00000624324 3103 ntBASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA3Q9Y5H0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 BNIP3P18-201ENST00000593976 575 ntBASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA3Q9Y5H0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 MIR5100-201ENST00000579544 119 ntBASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 AC114341.1-201ENST00000618070 349 ntBASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 AC067852.2-201ENST00000590513 2313 ntBASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA3Q9Y5H0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms