Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC106795.1-205ENST00000512851 1056 ntBASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 AC124864.1-201ENST00000623408 392 ntBASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 TSPY12P-201ENST00000421279 868 ntBASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 AC023511.2-201ENST00000618803 211 ntBASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB11Q9Y5F2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 AC138028.4-201ENST00000564984 1845 ntBASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB11Q9Y5F2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms