Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 GUSBP6-202ENST00000438529 1198 ntBASIC16.86■□□□□ 0.29
AP4S1Q9Y587 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.86■□□□□ 0.29
AP4S1Q9Y587 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AP4S1Q9Y587 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 NIFKP9-201ENST00000419265 221 ntBASIC16.85■□□□□ 0.29
AP4S1Q9Y587 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 MTDHP1-201ENST00000605323 784 ntBASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AC011298.2-201ENST00000617989 482 ntBASIC16.85■□□□□ 0.29
AP4S1Q9Y587 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 MST1L-201ENST00000442552 2185 ntBASIC16.85■□□□□ 0.29
AP4S1Q9Y587 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AC036111.1-201ENST00000533973 1582 ntBASIC16.85■□□□□ 0.29
AP4S1Q9Y587 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP4S1Q9Y587 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 AC060834.1-201ENST00000443027 2032 ntBASIC16.84■□□□□ 0.29
AP4S1Q9Y587 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 AL513477.1-201ENST00000602865 2407 ntBASIC16.84■□□□□ 0.29
AP4S1Q9Y587 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 TSPY6P-201ENST00000448518 926 ntBASIC16.84■□□□□ 0.29
AP4S1Q9Y587 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 LINC01451-201ENST00000623792 534 ntBASIC16.84■□□□□ 0.29
AP4S1Q9Y587 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms