Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 AGGF1P2-201ENST00000426656 2106 ntBASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 AC011298.2-201ENST00000617989 482 ntBASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.6□□□□□ -0.07
RCL1Q9Y2P8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 NCF1B-203ENST00000435988 1254 ntBASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 AC008040.2-201ENST00000461049 708 ntBASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 AL138781.1-201ENST00000566567 1274 ntBASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 AC069544.1-201ENST00000609399 999 ntBASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 HLA-J-201ENST00000462773 1622 ntBASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RCL1Q9Y2P8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RCL1Q9Y2P8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.58□□□□□ -0.07
RCL1Q9Y2P8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RCL1Q9Y2P8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RCL1Q9Y2P8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.58□□□□□ -0.07
RCL1Q9Y2P8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RCL1Q9Y2P8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 KRASP1-201ENST00000407852 552 ntBASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 UNC93B5-201ENST00000530315 699 ntBASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 AC008403.3-201ENST00000598924 454 ntBASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 MIR5787-201ENST00000611784 55 ntBASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms