Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 TOB2P1-201ENST00000469761 992 ntBASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 AP000867.3-201ENST00000524675 377 ntBASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 AL356309.3-201ENST00000624132 1934 ntBASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 AC132938.6-201ENST00000623828 1655 ntBASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 AC020916.1-201ENST00000587762 1774 ntBASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.36■□□□□ 0.21
RPH3AQ9Y2J0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 TPSP2-201ENST00000561760 610 ntBASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 MIR3180-1-201ENST00000580374 94 ntBASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 MIR3180-3-201ENST00000584616 94 ntBASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 AC023511.2-201ENST00000618803 211 ntBASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPH3AQ9Y2J0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 AC011840.4-201ENST00000578471 627 ntBASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms