Protein–RNA interactions for Protein: Q9Y259

CHKB, Choline/ethanolamine kinase, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKBQ9Y259 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CHKBQ9Y259 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKBQ9Y259 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.32■□□□□ 0.52
CHKBQ9Y259 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.32■□□□□ 0.52
CHKBQ9Y259 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKBQ9Y259 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKBQ9Y259 KRT89P-201ENST00000620027 1478 ntBASIC18.32■□□□□ 0.52
CHKBQ9Y259 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.32■□□□□ 0.52
CHKBQ9Y259 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKBQ9Y259 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKBQ9Y259 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 AC005332.1-201ENST00000577698 1310 ntBASIC18.31■□□□□ 0.52
CHKBQ9Y259 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 LINC00602-201ENST00000629776 2065 ntBASIC18.31■□□□□ 0.52
CHKBQ9Y259 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.31■□□□□ 0.52
CHKBQ9Y259 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.31■□□□□ 0.52
CHKBQ9Y259 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKBQ9Y259 AC093010.1-201ENST00000473625 1624 ntBASIC18.31■□□□□ 0.52
CHKBQ9Y259 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 IGHGP-201ENST00000390555 1178 ntBASIC18.3■□□□□ 0.52
CHKBQ9Y259 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 AC004263.2-201ENST00000617183 678 ntBASIC18.3■□□□□ 0.52
CHKBQ9Y259 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKBQ9Y259 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKBQ9Y259 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKBQ9Y259 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.29■□□□□ 0.52
CHKBQ9Y259 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms