Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 AC016734.2-201ENST00000624325 1377 ntBASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 AC011840.4-201ENST00000578471 627 ntBASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN4Q9NRR5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 TSSC2-201ENST00000450217 709 ntBASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 AL353801.3-201ENST00000609898 542 ntBASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 AL358472.4-201ENST00000633140 710 ntBASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN4Q9NRR5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN4Q9NRR5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms