Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 MCCD1P2-201ENST00000423228 335 ntBASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 YBX1P5-201ENST00000509441 847 ntBASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 AC097374.2-201ENST00000618617 1306 ntBASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM7Q9NR12 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 SNHG9-202ENST00000564014 471 ntBASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 AC005829.1-201ENST00000570002 483 ntBASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 AP000867.4-201ENST00000641616 219 ntBASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.84■□□□□ 0.77
PDLIM7Q9NR12 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 AC096633.1-201ENST00000422446 749 ntBASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 ALG1L5P-201ENST00000482043 771 ntBASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.83■□□□□ 0.77
PDLIM7Q9NR12 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms