Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMG20AQ9NP66 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 HYMAI-201ENST00000635591 3347 ntBASIC16.24■□□□□ 0.19
HMG20AQ9NP66 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 KRT18P6-201ENST00000555540 1265 ntBASIC16.24■□□□□ 0.19
HMG20AQ9NP66 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20AQ9NP66 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 PCDHB17P-201ENST00000539533 2393 ntBASIC16.23■□□□□ 0.19
HMG20AQ9NP66 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 KRT8P45-201ENST00000414328 1447 ntBASIC16.23■□□□□ 0.19
HMG20AQ9NP66 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 C1QL1P1-201ENST00000568105 661 ntBASIC16.23■□□□□ 0.19
HMG20AQ9NP66 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20AQ9NP66 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 AC233263.1-201ENST00000578059 224 ntBASIC16.22■□□□□ 0.19
HMG20AQ9NP66 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms