Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
SNRNP25Q9BV90 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 IER3-202ENST00000376377 1350 ntBASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 AC010331.1-201ENST00000611423 582 ntBASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 AC133963.1-201ENST00000504166 1679 ntBASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 FZD10-202ENST00000539839 3282 ntBASIC18.47■□□□□ 0.55
SNRNP25Q9BV90 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 CHCHD2P8-201ENST00000429873 447 ntBASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 AL353801.3-201ENST00000609898 542 ntBASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP25Q9BV90 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SNRNP25Q9BV90 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 MIR1224-201ENST00000408193 85 ntBASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 AC096633.1-201ENST00000422446 749 ntBASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 AC005336.2-201ENST00000593183 939 ntBASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 AL358472.4-201ENST00000633140 710 ntBASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP25Q9BV90 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms