Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 HMGA1P5-201ENST00000412453 271 ntBASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 TSPY15P-201ENST00000457163 923 ntBASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 KRT17P2-201ENST00000300992 1314 ntBASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 ECEL1P2-202ENST00000465689 757 ntBASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 NAPSB-206ENST00000562112 1266 ntBASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPPED1Q9BRF8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 ECEL1P3-201ENST00000427961 737 ntBASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 KRT89P-201ENST00000620027 1478 ntBASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPPED1Q9BRF8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.72■□□□□ 0.27
CPPED1Q9BRF8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms