Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 KRT8P9-201ENST00000558927 1449 ntBASIC20.3■□□□□ 0.84
ARID3AQ99856 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.3■□□□□ 0.84
ARID3AQ99856 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.3■□□□□ 0.84
ARID3AQ99856 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ARID3AQ99856 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ARID3AQ99856 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.29■□□□□ 0.84
ARID3AQ99856 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.29■□□□□ 0.84
ARID3AQ99856 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ARID3AQ99856 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.29■□□□□ 0.84
ARID3AQ99856 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.29■□□□□ 0.84
ARID3AQ99856 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ARID3AQ99856 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 GNAS-203ENST00000306120 1878 ntBASIC20.29■□□□□ 0.84
ARID3AQ99856 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.29■□□□□ 0.84
ARID3AQ99856 MIR1238-201ENST00000408483 83 ntBASIC20.29■□□□□ 0.84
ARID3AQ99856 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ARID3AQ99856 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.29■□□□□ 0.84
ARID3AQ99856 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 AP005242.2-201ENST00000580065 1175 ntBASIC20.29■□□□□ 0.84
ARID3AQ99856 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.29■□□□□ 0.84
ARID3AQ99856 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.29■□□□□ 0.84
ARID3AQ99856 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
ARID3AQ99856 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.29■□□□□ 0.84
ARID3AQ99856 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARID3AQ99856 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARID3AQ99856 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.28■□□□□ 0.84
ARID3AQ99856 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARID3AQ99856 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
ARID3AQ99856 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.28■□□□□ 0.84
ARID3AQ99856 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 FITM1-202ENST00000559294 800 ntBASIC20.28■□□□□ 0.84
ARID3AQ99856 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
ARID3AQ99856 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ARID3AQ99856 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.28■□□□□ 0.84
ARID3AQ99856 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARID3AQ99856 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ARID3AQ99856 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC20.27■□□□□ 0.84
ARID3AQ99856 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ARID3AQ99856 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ARID3AQ99856 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARID3AQ99856 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms