Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 CROCCP3-202ENST00000420820 1947 ntBASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 BCAR1-209ENST00000546196 1340 ntBASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 DDX43P3-201ENST00000441064 443 ntBASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.65■■□□□ 1.06
CRAMP1Q96RY5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CRAMP1Q96RY5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 IGHV3-52-201ENST00000519770 353 ntBASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.64■■□□□ 1.05
CRAMP1Q96RY5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 LINC00982-205ENST00000420957 435 ntBASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 ACTG1P14-201ENST00000446382 1122 ntBASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 AC027612.4-201ENST00000605371 583 ntBASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRAMP1Q96RY5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 AC074386.1-202ENST00000463561 864 ntBASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms