Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 AC079781.3-201ENST00000449110 356 ntBASIC19.31■□□□□ 0.68
ACAP3Q96P50 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 AL121912.1-201ENST00000603683 238 ntBASIC19.31■□□□□ 0.68
ACAP3Q96P50 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 LETM1P2-201ENST00000597330 2178 ntBASIC19.31■□□□□ 0.68
ACAP3Q96P50 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACAP3Q96P50 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.31■□□□□ 0.68
ACAP3Q96P50 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACAP3Q96P50 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.3■□□□□ 0.68
ACAP3Q96P50 AC138028.4-201ENST00000564984 1845 ntBASIC19.3■□□□□ 0.68
ACAP3Q96P50 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 AL160237.2-201ENST00000556165 472 ntBASIC19.29■□□□□ 0.68
ACAP3Q96P50 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 AC104692.2-201ENST00000603054 253 ntBASIC19.29■□□□□ 0.68
ACAP3Q96P50 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACAP3Q96P50 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.29■□□□□ 0.68
ACAP3Q96P50 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACAP3Q96P50 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACAP3Q96P50 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACAP3Q96P50 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACAP3Q96P50 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 COX5BP2-201ENST00000392354 334 ntBASIC19.28■□□□□ 0.68
ACAP3Q96P50 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 ABCD1P5-201ENST00000445663 754 ntBASIC19.28■□□□□ 0.68
ACAP3Q96P50 AC122714.2-201ENST00000502787 707 ntBASIC19.28■□□□□ 0.68
ACAP3Q96P50 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACAP3Q96P50 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.28■□□□□ 0.68
ACAP3Q96P50 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms