Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 AP006288.1-201ENST00000446065 395 ntBASIC21.9■■□□□ 1.1
NLRP3Q96P20 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 AC027796.2-201ENST00000575326 344 ntBASIC21.9■■□□□ 1.1
NLRP3Q96P20 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 AC116407.2-201ENST00000613639 860 ntBASIC21.9■■□□□ 1.1
NLRP3Q96P20 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NLRP3Q96P20 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.9■■□□□ 1.1
NLRP3Q96P20 RNF165-205ENST00000588679 2904 ntBASIC21.9■■□□□ 1.1
NLRP3Q96P20 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
NLRP3Q96P20 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.89■■□□□ 1.1
NLRP3Q96P20 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NLRP3Q96P20 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NLRP3Q96P20 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
NLRP3Q96P20 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 HMGN1P19-201ENST00000436976 333 ntBASIC21.89■■□□□ 1.09
NLRP3Q96P20 PRSS29P-201ENST00000440800 595 ntBASIC21.89■■□□□ 1.09
NLRP3Q96P20 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 AL355385.1-201ENST00000606123 409 ntBASIC21.89■■□□□ 1.09
NLRP3Q96P20 AC004790.2-201ENST00000623588 572 ntBASIC21.89■■□□□ 1.09
NLRP3Q96P20 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 AC092865.6-201ENST00000642101 219 ntBASIC21.89■■□□□ 1.09
NLRP3Q96P20 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NLRP3Q96P20 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NLRP3Q96P20 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 HCG4B-203ENST00000450128 991 ntBASIC21.88■■□□□ 1.09
NLRP3Q96P20 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.88■■□□□ 1.09
NLRP3Q96P20 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NLRP3Q96P20 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.87■■□□□ 1.09
NLRP3Q96P20 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.87■■□□□ 1.09
NLRP3Q96P20 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NLRP3Q96P20 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.87■■□□□ 1.09
NLRP3Q96P20 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.87■■□□□ 1.09
NLRP3Q96P20 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.87■■□□□ 1.09
NLRP3Q96P20 YBX1P5-201ENST00000509441 847 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms