Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.72■□□□□ 0.91
CCDC17Q96LX7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC17Q96LX7 ZNF259P1-201ENST00000407656 1365 ntBASIC20.71■□□□□ 0.91
CCDC17Q96LX7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC17Q96LX7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC17Q96LX7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 AC092910.1-201ENST00000482027 1129 ntBASIC20.7■□□□□ 0.9
CCDC17Q96LX7 AC002558.1-201ENST00000488906 803 ntBASIC20.7■□□□□ 0.9
CCDC17Q96LX7 KRT18P58-201ENST00000527480 1120 ntBASIC20.7■□□□□ 0.9
CCDC17Q96LX7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 AC004817.3-201ENST00000602957 2129 ntBASIC20.7■□□□□ 0.9
CCDC17Q96LX7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC17Q96LX7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 KLF4P1-201ENST00000412782 1185 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AC098831.1-202ENST00000438821 336 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 IGHV3-52-201ENST00000519770 353 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AC006557.2-201ENST00000592985 1240 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AL589182.2-201ENST00000619332 1049 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AC117500.6-201ENST00000624871 588 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AC138028.4-201ENST00000564984 1845 ntBASIC20.69■□□□□ 0.9
CCDC17Q96LX7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC17Q96LX7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms