Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 TSPY14P-201ENST00000303979 915 ntBASIC15.52■□□□□ 0.08
CPNE2Q96FN4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 AP000525.1-201ENST00000608286 694 ntBASIC15.52■□□□□ 0.08
CPNE2Q96FN4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CPNE2Q96FN4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 LINC01126-201ENST00000623515 1646 ntBASIC15.51■□□□□ 0.07
CPNE2Q96FN4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 MIR1238-201ENST00000408483 83 ntBASIC15.51■□□□□ 0.07
CPNE2Q96FN4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 AC008550.1-201ENST00000511500 884 ntBASIC15.51■□□□□ 0.07
CPNE2Q96FN4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE2Q96FN4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 NEK4P2-201ENST00000580004 1012 ntBASIC15.5■□□□□ 0.07
CPNE2Q96FN4 Z99916.2-201ENST00000604037 246 ntBASIC15.5■□□□□ 0.07
CPNE2Q96FN4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE2Q96FN4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms