Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.68■■□□□ 1.06
CNKSR1Q969H4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CNKSR1Q969H4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNKSR1Q969H4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.68■■□□□ 1.06
CNKSR1Q969H4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CNKSR1Q969H4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 PHGDH-209ENST00000641074 1780 ntBASIC21.67■■□□□ 1.06
CNKSR1Q969H4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 STK19B-204ENST00000512515 211 ntBASIC21.67■■□□□ 1.06
CNKSR1Q969H4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 AC025678.2-201ENST00000562061 970 ntBASIC21.67■■□□□ 1.06
CNKSR1Q969H4 AL353135.1-201ENST00000606729 504 ntBASIC21.67■■□□□ 1.06
CNKSR1Q969H4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 AC097637.2-201ENST00000624096 1997 ntBASIC21.67■■□□□ 1.06
CNKSR1Q969H4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNKSR1Q969H4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 AC109462.3-201ENST00000573934 613 ntBASIC21.66■■□□□ 1.06
CNKSR1Q969H4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 STK25P1-201ENST00000585406 838 ntBASIC21.66■■□□□ 1.06
CNKSR1Q969H4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR1Q969H4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 AC092474.2-201ENST00000424288 719 ntBASIC21.65■■□□□ 1.06
CNKSR1Q969H4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR1Q969H4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.64■■□□□ 1.06
CNKSR1Q969H4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.64■■□□□ 1.06
CNKSR1Q969H4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
CNKSR1Q969H4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR1Q969H4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR1Q969H4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.64■■□□□ 1.05
CNKSR1Q969H4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR1Q969H4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR1Q969H4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.64■■□□□ 1.05
CNKSR1Q969H4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms