Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.85■□□□□ 0.29
TM9SF4Q92544 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF4Q92544 AC139713.2-201ENST00000641328 2723 ntBASIC16.85■□□□□ 0.29
TM9SF4Q92544 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TM9SF4Q92544 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF4Q92544 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 NSUN5P1-202ENST00000421140 1535 ntBASIC16.85■□□□□ 0.29
TM9SF4Q92544 NSUN5P2-203ENST00000457352 1529 ntBASIC16.85■□□□□ 0.29
TM9SF4Q92544 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF4Q92544 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TM9SF4Q92544 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF4Q92544 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 AL022342.1-201ENST00000400363 863 ntBASIC16.84■□□□□ 0.29
TM9SF4Q92544 SAPCD2P3-201ENST00000455031 850 ntBASIC16.84■□□□□ 0.29
TM9SF4Q92544 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.84■□□□□ 0.29
TM9SF4Q92544 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF4Q92544 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.84■□□□□ 0.29
TM9SF4Q92544 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
TM9SF4Q92544 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM9SF4Q92544 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM9SF4Q92544 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM9SF4Q92544 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM9SF4Q92544 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 NUS1P2-201ENST00000417358 873 ntBASIC16.83■□□□□ 0.28
TM9SF4Q92544 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF4Q92544 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TM9SF4Q92544 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
TM9SF4Q92544 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF4Q92544 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms