Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HLA-J-201ENST00000462773 1622 ntBASIC30.39■■■□□ 2.46
TRIM41Q8WV44 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TRIM41Q8WV44 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC30.39■■■□□ 2.45
TRIM41Q8WV44 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
TRIM41Q8WV44 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
TRIM41Q8WV44 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC30.39■■■□□ 2.45
TRIM41Q8WV44 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 AC090164.3-201ENST00000610780 2143 ntBASIC30.38■■■□□ 2.45
TRIM41Q8WV44 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC30.38■■■□□ 2.45
TRIM41Q8WV44 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 AC005498.2-205ENST00000593218 784 ntBASIC30.37■■■□□ 2.45
TRIM41Q8WV44 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 MIR6799-201ENST00000620297 69 ntBASIC30.37■■■□□ 2.45
TRIM41Q8WV44 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM41Q8WV44 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 POR-209ENST00000439269 1858 ntTSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AL138831.2-201ENST00000606564 490 ntBASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM41Q8WV44 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 CCS-201ENST00000310190 942 ntTSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 PAM16-208ENST00000573553 722 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 MTDHP3-201ENST00000594186 672 ntBASIC30.35■■■□□ 2.45
TRIM41Q8WV44 AC027612.4-201ENST00000605371 583 ntBASIC30.35■■■□□ 2.45
TRIM41Q8WV44 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM41Q8WV44 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 AC125634.1-201ENST00000438758 1403 ntBASIC30.34■■■□□ 2.45
TRIM41Q8WV44 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC30.34■■■□□ 2.45
TRIM41Q8WV44 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms