Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 AK4P3-201ENST00000418260 669 ntBASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 TSPY5P-201ENST00000426936 936 ntBASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 HOMER2P1-201ENST00000455653 964 ntBASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 AC116407.2-201ENST00000613639 860 ntBASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 HLA-F-220ENST00000434407 884 ntBASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 KRT18P65-201ENST00000439811 1286 ntBASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF444P1-201ENST00000559497 298 ntBASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP1Q8TDR0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAF3IP1Q8TDR0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 AL359075.1-203ENST00000462729 1002 ntBASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 AC092597.1-201ENST00000487352 616 ntBASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms