Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 Z83836.1-201ENST00000624605 1642 ntBASIC16.7■□□□□ 0.26
NUP43Q8NFH3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP43Q8NFH3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 AL645929.1-201ENST00000420084 975 ntBASIC16.68■□□□□ 0.26
NUP43Q8NFH3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUP43Q8NFH3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 DDX43P3-201ENST00000441064 443 ntBASIC16.67■□□□□ 0.26
NUP43Q8NFH3 MTCL1P1-201ENST00000446207 792 ntBASIC16.67■□□□□ 0.26
NUP43Q8NFH3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 AC068472.1-201ENST00000474589 881 ntBASIC16.67■□□□□ 0.26
NUP43Q8NFH3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms