Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 ARMC10P1-201ENST00000313754 855 ntBASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 DDX43P3-201ENST00000441064 443 ntBASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 KRT18P35-201ENST00000510488 1269 ntBASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AC091076.1-201ENST00000610741 619 ntBASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AP000550.4-202ENST00000639755 178 ntBASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 RN7SL606P-201ENST00000472779 293 ntBASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFBP1Q8NEF9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 AC018470.1-201ENST00000624790 3129 ntBASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.02■□□□□ 0.31
SRFBP1Q8NEF9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 CHCHD2P8-201ENST00000429873 447 ntBASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 VENTXP7-201ENST00000475503 772 ntBASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 AC011840.4-201ENST00000578471 627 ntBASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 AC124864.1-201ENST00000623408 392 ntBASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFBP1Q8NEF9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms