Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPEB3Q8NE35 AC016734.2-201ENST00000624325 1377 ntBASIC15.62■□□□□ 0.09
CPEB3Q8NE35 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 BX276092.5-203ENST00000456199 560 ntBASIC15.61■□□□□ 0.09
CPEB3Q8NE35 RN7SL606P-201ENST00000472779 293 ntBASIC15.61■□□□□ 0.09
CPEB3Q8NE35 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 GUSBP12-201ENST00000513727 720 ntBASIC15.61■□□□□ 0.09
CPEB3Q8NE35 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 AC012317.2-201ENST00000623305 2251 ntBASIC15.61■□□□□ 0.09
CPEB3Q8NE35 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPEB3Q8NE35 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AC090616.6-201ENST00000582640 721 ntBASIC15.6■□□□□ 0.09
CPEB3Q8NE35 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AL121672.3-201ENST00000608644 468 ntBASIC15.6■□□□□ 0.09
CPEB3Q8NE35 IGHV3-41-201ENST00000613121 348 ntBASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AC124864.1-201ENST00000623408 392 ntBASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 KRT8P47-201ENST00000604727 1398 ntBASIC15.6■□□□□ 0.09
CPEB3Q8NE35 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPEB3Q8NE35 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPEB3Q8NE35 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPEB3Q8NE35 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.59■□□□□ 0.09
CPEB3Q8NE35 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPEB3Q8NE35 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.59■□□□□ 0.09
CPEB3Q8NE35 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms