Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF248Q8NDW4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 MIR3197-201ENST00000582241 73 ntBASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 AC009154.2-201ENST00000621177 724 ntBASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF248Q8NDW4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.02■□□□□ 0.31
ZNF248Q8NDW4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 MIR149-201ENST00000384879 89 ntBASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 KRT18P41-201ENST00000518924 1277 ntBASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF248Q8NDW4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 CROCCP3-202ENST00000420820 1947 ntBASIC17■□□□□ 0.31
ZNF248Q8NDW4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF248Q8NDW4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZNF248Q8NDW4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17■□□□□ 0.31
ZNF248Q8NDW4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms