Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 AP000997.3-201ENST00000623333 2250 ntBASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 PMS2P1-201ENST00000431037 1228 ntBASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 BX005266.1-201ENST00000473402 457 ntBASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 IGHV3-22-201ENST00000520721 359 ntBASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC38A9Q8NBW4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 AC009113.1-201ENST00000570267 2443 ntBASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 HLA-J-201ENST00000462773 1622 ntBASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A9Q8NBW4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 AC073592.4-201ENST00000623827 446 ntBASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 AC090164.3-201ENST00000610780 2143 ntBASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A9Q8NBW4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 AL049757.1-201ENST00000616842 1596 ntBASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A9Q8NBW4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms