Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
DNAAF3Q8N9W5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 RNF152P1-201ENST00000397754 604 ntBASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 TSPY5P-201ENST00000426936 936 ntBASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNAAF3Q8N9W5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AK4P3-201ENST00000418260 669 ntBASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 HLA-F-220ENST00000434407 884 ntBASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 KRT18P65-201ENST00000439811 1286 ntBASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 HOMER2P1-201ENST00000455653 964 ntBASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AC092597.1-201ENST00000487352 616 ntBASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AC116407.2-201ENST00000613639 860 ntBASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNAAF3Q8N9W5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNAAF3Q8N9W5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms