Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39CQ8N584 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39CQ8N584 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 TP73-AS1-210ENST00000637775 1455 ntBASIC18.92■□□□□ 0.62
TTC39CQ8N584 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 AC005104.2-201ENST00000427818 678 ntBASIC18.92■□□□□ 0.62
TTC39CQ8N584 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 BNIP3P18-201ENST00000593976 575 ntBASIC18.92■□□□□ 0.62
TTC39CQ8N584 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 AC114341.1-201ENST00000618070 349 ntBASIC18.92■□□□□ 0.62
TTC39CQ8N584 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 AC010460.3-201ENST00000511359 1579 ntBASIC18.92■□□□□ 0.62
TTC39CQ8N584 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39CQ8N584 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TTC39CQ8N584 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 OR6D1P-202ENST00000641007 5290 ntBASIC18.91■□□□□ 0.62
TTC39CQ8N584 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 AC002558.1-201ENST00000488906 803 ntBASIC18.91■□□□□ 0.62
TTC39CQ8N584 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39CQ8N584 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39CQ8N584 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TTC39CQ8N584 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39CQ8N584 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms