Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PROM2Q8N271 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.56■■□□□ 1.2
PROM2Q8N271 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PROM2Q8N271 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
PROM2Q8N271 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PROM2Q8N271 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.55■■□□□ 1.2
PROM2Q8N271 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PROM2Q8N271 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 GRAP-202ENST00000395635 834 ntTSL 2 BASIC22.55■■□□□ 1.2
PROM2Q8N271 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.55■■□□□ 1.2
PROM2Q8N271 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.55■■□□□ 1.2
PROM2Q8N271 FAM58DP-201ENST00000428076 619 ntBASIC22.55■■□□□ 1.2
PROM2Q8N271 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.55■■□□□ 1.2
PROM2Q8N271 DDX43P3-201ENST00000441064 443 ntBASIC22.55■■□□□ 1.2
PROM2Q8N271 AC022494.1-201ENST00000466044 728 ntBASIC22.55■■□□□ 1.2
PROM2Q8N271 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 AL512356.2-201ENST00000546955 174 ntBASIC22.55■■□□□ 1.2
PROM2Q8N271 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.55■■□□□ 1.2
PROM2Q8N271 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.55■■□□□ 1.2
PROM2Q8N271 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.55■■□□□ 1.2
PROM2Q8N271 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PROM2Q8N271 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC22.54■■□□□ 1.2
PROM2Q8N271 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.54■■□□□ 1.2
PROM2Q8N271 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC22.54■■□□□ 1.2
PROM2Q8N271 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.54■■□□□ 1.2
PROM2Q8N271 FAM207CP-201ENST00000443486 507 ntBASIC22.54■■□□□ 1.2
PROM2Q8N271 FAM185BP-201ENST00000443595 716 ntBASIC22.54■■□□□ 1.2
PROM2Q8N271 TIMM8BP1-201ENST00000452384 211 ntBASIC22.54■■□□□ 1.2
PROM2Q8N271 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC22.54■■□□□ 1.2
PROM2Q8N271 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.54■■□□□ 1.2
PROM2Q8N271 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.54■■□□□ 1.2
PROM2Q8N271 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PROM2Q8N271 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.54■■□□□ 1.2
PROM2Q8N271 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PROM2Q8N271 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 KLF4P1-201ENST00000412782 1185 ntBASIC22.53■■□□□ 1.2
PROM2Q8N271 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.53■■□□□ 1.2
PROM2Q8N271 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.53■■□□□ 1.2
PROM2Q8N271 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22.53■■□□□ 1.2
PROM2Q8N271 AC069335.1-201ENST00000489972 472 ntBASIC22.53■■□□□ 1.2
PROM2Q8N271 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.53■■□□□ 1.2
PROM2Q8N271 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.53■■□□□ 1.2
PROM2Q8N271 TUBB3P1-201ENST00000405796 1332 ntBASIC22.53■■□□□ 1.2
PROM2Q8N271 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.53■■□□□ 1.2
PROM2Q8N271 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PROM2Q8N271 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PROM2Q8N271 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.52■■□□□ 1.2
PROM2Q8N271 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.52■■□□□ 1.2
PROM2Q8N271 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PROM2Q8N271 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PROM2Q8N271 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PROM2Q8N271 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC22.52■■□□□ 1.2
PROM2Q8N271 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.52■■□□□ 1.2
PROM2Q8N271 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms