Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 NEK4P2-201ENST00000580004 1012 ntBASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 MIR3917-201ENST00000580971 93 ntBASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 AC132938.6-201ENST00000623828 1655 ntBASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC50Q8IVM0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 LINC01568-207ENST00000641790 1380 ntBASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC50Q8IVM0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC50Q8IVM0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 AC100803.2-201ENST00000562459 1963 ntBASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms