Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 AC008735.5-201ENST00000623544 497 ntBASIC18.87■□□□□ 0.61
RNF135Q8IUD6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF135Q8IUD6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 AC239800.4-201ENST00000603712 296 ntBASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 INTS4P1-201ENST00000438455 1935 ntBASIC18.86■□□□□ 0.61
RNF135Q8IUD6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF135Q8IUD6 ANO7L1-203ENST00000602586 1720 ntBASIC18.86■□□□□ 0.61
RNF135Q8IUD6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
RNF135Q8IUD6 AC009533.2-201ENST00000543664 586 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms