Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.82■□□□□ 0.76
TRIM50Q86XT4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 RPL13AP23-201ENST00000480739 586 ntBASIC19.82■□□□□ 0.76
TRIM50Q86XT4 POLD2P1-201ENST00000511220 997 ntBASIC19.82■□□□□ 0.76
TRIM50Q86XT4 MTDHP4-201ENST00000600287 670 ntBASIC19.82■□□□□ 0.76
TRIM50Q86XT4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.82■□□□□ 0.76
TRIM50Q86XT4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.82■□□□□ 0.76
TRIM50Q86XT4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM50Q86XT4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 OR7E14P-202ENST00000530490 1290 ntBASIC19.81■□□□□ 0.76
TRIM50Q86XT4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 AC106730.1-201ENST00000566722 1090 ntBASIC19.81■□□□□ 0.76
TRIM50Q86XT4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 PMPCAP1-201ENST00000508114 1576 ntBASIC19.81■□□□□ 0.76
TRIM50Q86XT4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM50Q86XT4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AC092910.1-201ENST00000482027 1129 ntBASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM50Q86XT4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 AC022898.2-201ENST00000616822 1312 ntBASIC19.79■□□□□ 0.76
TRIM50Q86XT4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 AL138781.2-201ENST00000617896 1843 ntBASIC19.79■□□□□ 0.76
TRIM50Q86XT4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM50Q86XT4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms