Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 HMGN1P19-201ENST00000436976 333 ntBASIC23.69■■□□□ 1.38
USP31Q70CQ4 IGHV3-52-201ENST00000519770 353 ntBASIC23.69■■□□□ 1.38
USP31Q70CQ4 AC005829.1-201ENST00000570002 483 ntBASIC23.69■■□□□ 1.38
USP31Q70CQ4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.69■■□□□ 1.38
USP31Q70CQ4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
USP31Q70CQ4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.69■■□□□ 1.38
USP31Q70CQ4 C20orf181-201ENST00000623918 480 ntBASIC23.69■■□□□ 1.38
USP31Q70CQ4 AC010507.1-201ENST00000633895 436 ntBASIC23.69■■□□□ 1.38
USP31Q70CQ4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
USP31Q70CQ4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.69■■□□□ 1.38
USP31Q70CQ4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP31Q70CQ4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 MRPL20P1-201ENST00000400819 433 ntBASIC23.68■■□□□ 1.38
USP31Q70CQ4 LINC00982-205ENST00000420957 435 ntBASIC23.68■■□□□ 1.38
USP31Q70CQ4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
USP31Q70CQ4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP31Q70CQ4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 MKNK2P1-201ENST00000437526 628 ntBASIC23.67■■□□□ 1.38
USP31Q70CQ4 RHOQP3-201ENST00000437982 621 ntBASIC23.67■■□□□ 1.38
USP31Q70CQ4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
USP31Q70CQ4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP31Q70CQ4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 AC097637.2-201ENST00000624096 1997 ntBASIC23.66■■□□□ 1.38
USP31Q70CQ4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP31Q70CQ4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.66■■□□□ 1.38
USP31Q70CQ4 AP000997.3-201ENST00000623333 2250 ntBASIC23.66■■□□□ 1.38
USP31Q70CQ4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 MYCLP1-201ENST00000372451 1075 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 ACTG1P4-201ENST00000425123 1122 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 AC096734.2-201ENST00000562054 433 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 PDPK2P-202ENST00000562415 1191 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 MIR4469-201ENST00000583919 79 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 AL355385.1-201ENST00000606123 409 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 KRT18P55-202ENST00000578578 1546 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms