Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 RBM17P3-201ENST00000417687 1192 ntBASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 AC106795.1-205ENST00000512851 1056 ntBASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 AC104692.2-201ENST00000603054 253 ntBASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 AC008608.2-201ENST00000606089 416 ntBASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDPD4Q6W3E5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AP005117.1-201ENST00000584346 1413 ntBASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AC103564.2-201ENST00000432853 1299 ntBASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AL160237.2-201ENST00000556165 472 ntBASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 MTDHP3-201ENST00000594186 672 ntBASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GDPD4Q6W3E5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 BX276092.7-203ENST00000637198 1536 ntBASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GDPD4Q6W3E5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 AL355877.3-201ENST00000622820 899 ntBASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDPD4Q6W3E5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms