Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AL353135.1-201ENST00000606729 504 ntBASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 IGHV3-52-201ENST00000519770 353 ntBASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 OR7E47P-204ENST00000575924 449 ntBASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 AC116407.2-201ENST00000613639 860 ntBASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 AC007064.4-201ENST00000637740 555 ntBASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNKSR3Q6P9H4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 AC025580.3-201ENST00000617932 1424 ntBASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 AC093028.1-201ENST00000622998 982 ntBASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNKSR3Q6P9H4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 BX276092.7-203ENST00000637198 1536 ntBASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 AC023141.13-201ENST00000604991 943 ntBASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNKSR3Q6P9H4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNKSR3Q6P9H4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.02■□□□□ 0.63
CNKSR3Q6P9H4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNKSR3Q6P9H4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNKSR3Q6P9H4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNKSR3Q6P9H4 AC009336.1-201ENST00000608941 1553 ntBASIC19.02■□□□□ 0.63
CNKSR3Q6P9H4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 LINC00982-205ENST00000420957 435 ntBASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNKSR3Q6P9H4 AC091812.2-201ENST00000619081 385 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms