Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 AC104109.2-201ENST00000602919 1418 ntBASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 PMS2P7-201ENST00000506558 1336 ntBASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC62Q6P9F0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 SIGLEC16-201ENST00000599858 1437 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 RNA5SP415-201ENST00000517246 115 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 PGAM5P1-201ENST00000518923 814 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 AC105339.3-201ENST00000560043 636 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 TERC-201ENST00000602385 541 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 AC139530.3-201ENST00000620344 690 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 AC004408.2-201ENST00000623613 2777 ntBASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC62Q6P9F0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AC020763.4-201ENST00000623414 4170 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 LAGE3P1-201ENST00000425356 484 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AC103564.2-201ENST00000432853 1299 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AL022326.1-202ENST00000641533 845 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AP002414.3-201ENST00000589352 1468 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 WIZP1-201ENST00000531444 2299 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 AC004817.3-201ENST00000602957 2129 ntBASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC62Q6P9F0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 KRT18P13-201ENST00000400056 1290 ntBASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 MIR940-201ENST00000401276 94 ntBASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 SPDYE21P-201ENST00000413323 827 ntBASIC19.95■□□□□ 0.78
CCDC62Q6P9F0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms