Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CASC4Q6P4E1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 AL355312.1-201ENST00000407115 2176 ntBASIC18.2■□□□□ 0.5
CASC4Q6P4E1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 AC034232.1-201ENST00000506026 1064 ntBASIC18.2■□□□□ 0.5
CASC4Q6P4E1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 GCSHP2-201ENST00000560971 527 ntBASIC18.2■□□□□ 0.5
CASC4Q6P4E1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASC4Q6P4E1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 AC139713.2-201ENST00000641328 2723 ntBASIC18.19■□□□□ 0.5
CASC4Q6P4E1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 LIN28AP1-201ENST00000429574 405 ntBASIC18.19■□□□□ 0.5
CASC4Q6P4E1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 AC140113.3-201ENST00000605663 199 ntBASIC18.19■□□□□ 0.5
CASC4Q6P4E1 NFIC-211ENST00000641145 8399 ntBASIC18.19■□□□□ 0.5
CASC4Q6P4E1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 FER1L4-210ENST00000615531 5998 ntBASIC18.19■□□□□ 0.5
CASC4Q6P4E1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.19■□□□□ 0.5
CASC4Q6P4E1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASC4Q6P4E1 AC087499.1-201ENST00000418141 1075 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms