Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SNAPC4Q5SXM2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
SNAPC4Q5SXM2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SNAPC4Q5SXM2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC28.87■■■□□ 2.21
SNAPC4Q5SXM2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 WRB-204ENST00000398753 699 ntTSL 3 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 LINC00982-205ENST00000420957 435 ntBASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 KLF2P3-201ENST00000451977 1087 ntBASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 AP001059.3-201ENST00000619053 235 ntBASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC28.86■■■□□ 2.21
SNAPC4Q5SXM2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 KRT18P32-201ENST00000424695 1287 ntBASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 CRB3P1-201ENST00000449338 276 ntBASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 ESPNP-201ENST00000270691 2015 ntBASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 OR8S1-201ENST00000310194 1080 ntBASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 MIR943-201ENST00000401286 94 ntBASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 AL512356.2-201ENST00000546955 174 ntBASIC28.85■■■□□ 2.21
SNAPC4Q5SXM2 AC097637.2-201ENST00000624096 1997 ntBASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 FAM58DP-201ENST00000428076 619 ntBASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 GATB-205ENST00000508611 605 ntTSL 2 BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
SNAPC4Q5SXM2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 AC009336.1-201ENST00000608941 1553 ntBASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 LINC02560-201ENST00000596379 459 ntBASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SNAPC4Q5SXM2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC28.83■■■□□ 2.2
SNAPC4Q5SXM2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 AC125807.1-201ENST00000483097 614 ntBASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 AC069335.1-201ENST00000489972 472 ntBASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNAPC4Q5SXM2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms