Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RUNDC3AQ59EK9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 OR6D1P-202ENST00000641007 5290 ntBASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RUNDC3AQ59EK9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 DDX43P3-201ENST00000441064 443 ntBASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 AC113404.2-201ENST00000507884 177 ntBASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 AC092865.7-201ENST00000641832 219 ntBASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RUNDC3AQ59EK9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
RUNDC3AQ59EK9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RUNDC3AQ59EK9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RUNDC3AQ59EK9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RUNDC3AQ59EK9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RUNDC3AQ59EK9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RUNDC3AQ59EK9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms