Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.43■□□□□ 0.86
USH1GQ495M9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
USH1GQ495M9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 SIRPAP1-201ENST00000448467 1770 ntBASIC20.42■□□□□ 0.86
USH1GQ495M9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.42■□□□□ 0.86
USH1GQ495M9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
USH1GQ495M9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.42■□□□□ 0.86
USH1GQ495M9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.42■□□□□ 0.86
USH1GQ495M9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 SART3-203ENST00000546611 1184 ntBASIC20.42■□□□□ 0.86
USH1GQ495M9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.42■□□□□ 0.86
USH1GQ495M9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.42■□□□□ 0.86
USH1GQ495M9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USH1GQ495M9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.42■□□□□ 0.86
USH1GQ495M9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
USH1GQ495M9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.42■□□□□ 0.86
USH1GQ495M9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USH1GQ495M9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.41■□□□□ 0.86
USH1GQ495M9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.41■□□□□ 0.86
USH1GQ495M9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.41■□□□□ 0.86
USH1GQ495M9 RNPS1P1-201ENST00000507437 918 ntBASIC20.41■□□□□ 0.86
USH1GQ495M9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 AC073648.2-201ENST00000510116 352 ntBASIC20.41■□□□□ 0.86
USH1GQ495M9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.41■□□□□ 0.86
USH1GQ495M9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.41■□□□□ 0.86
USH1GQ495M9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.41■□□□□ 0.86
USH1GQ495M9 AP001005.1-201ENST00000571755 1248 ntBASIC20.41■□□□□ 0.86
USH1GQ495M9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.41■□□□□ 0.86
USH1GQ495M9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.41■□□□□ 0.86
USH1GQ495M9 AC064862.7-201ENST00000604520 867 ntBASIC20.41■□□□□ 0.86
USH1GQ495M9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.41■□□□□ 0.86
USH1GQ495M9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USH1GQ495M9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.41■□□□□ 0.86
USH1GQ495M9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.41■□□□□ 0.86
USH1GQ495M9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.41■□□□□ 0.86
USH1GQ495M9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.4■□□□□ 0.86
USH1GQ495M9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
USH1GQ495M9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.4■□□□□ 0.86
USH1GQ495M9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.4■□□□□ 0.86
USH1GQ495M9 SCARNA2-201ENST00000458748 420 ntBASIC20.4■□□□□ 0.86
USH1GQ495M9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
USH1GQ495M9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.4■□□□□ 0.86
USH1GQ495M9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.4■□□□□ 0.86
USH1GQ495M9 RNA5SP419-201ENST00000515908 135 ntBASIC20.4■□□□□ 0.86
USH1GQ495M9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.4■□□□□ 0.86
USH1GQ495M9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
USH1GQ495M9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.4■□□□□ 0.86
USH1GQ495M9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.4■□□□□ 0.86
USH1GQ495M9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
USH1GQ495M9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USH1GQ495M9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USH1GQ495M9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms