Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.57■□□□□ 0.72
NFX1Q12986 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NFX1Q12986 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.57■□□□□ 0.72
NFX1Q12986 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NFX1Q12986 AL356309.3-201ENST00000624132 1934 ntBASIC19.57■□□□□ 0.72
NFX1Q12986 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.56■□□□□ 0.72
NFX1Q12986 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NFX1Q12986 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 RPS2P1-201ENST00000434010 821 ntBASIC19.56■□□□□ 0.72
NFX1Q12986 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.56■□□□□ 0.72
NFX1Q12986 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.56■□□□□ 0.72
NFX1Q12986 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.56■□□□□ 0.72
NFX1Q12986 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 AC106730.1-201ENST00000566722 1090 ntBASIC19.56■□□□□ 0.72
NFX1Q12986 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NFX1Q12986 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NFX1Q12986 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
NFX1Q12986 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFX1Q12986 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NFX1Q12986 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.55■□□□□ 0.72
NFX1Q12986 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.55■□□□□ 0.72
NFX1Q12986 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.55■□□□□ 0.72
NFX1Q12986 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.55■□□□□ 0.72
NFX1Q12986 MIR940-201ENST00000401276 94 ntBASIC19.55■□□□□ 0.72
NFX1Q12986 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NFX1Q12986 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.55■□□□□ 0.72
NFX1Q12986 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.55■□□□□ 0.72
NFX1Q12986 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 HTR7P1-202ENST00000624664 4411 ntBASIC19.55■□□□□ 0.72
NFX1Q12986 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NFX1Q12986 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFX1Q12986 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 AL354751.1-201ENST00000412768 1863 ntBASIC19.54■□□□□ 0.72
NFX1Q12986 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NFX1Q12986 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.54■□□□□ 0.72
NFX1Q12986 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 FAM220CP-201ENST00000395253 831 ntBASIC19.54■□□□□ 0.72
NFX1Q12986 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.54■□□□□ 0.72
NFX1Q12986 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.54■□□□□ 0.72
NFX1Q12986 AC007967.3-201ENST00000434308 558 ntBASIC19.54■□□□□ 0.72
NFX1Q12986 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 POLD2P1-201ENST00000511220 997 ntBASIC19.54■□□□□ 0.72
NFX1Q12986 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 KRT18P58-201ENST00000527480 1120 ntBASIC19.54■□□□□ 0.72
NFX1Q12986 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.54■□□□□ 0.72
NFX1Q12986 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.54■□□□□ 0.72
NFX1Q12986 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
NFX1Q12986 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 AC117500.6-201ENST00000624871 588 ntBASIC19.54■□□□□ 0.72
NFX1Q12986 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFX1Q12986 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NFX1Q12986 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms