Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HMGXB3Q12766 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HMGXB3Q12766 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HMGXB3Q12766 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 AC079140.1-201ENST00000508039 487 ntBASIC31.05■■■□□ 2.56
HMGXB3Q12766 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HMGXB3Q12766 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HMGXB3Q12766 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HMGXB3Q12766 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC31.05■■■□□ 2.56
HMGXB3Q12766 ME2-218ENST00000640965 2476 ntTSL 5 BASIC31.04■■■□□ 2.56
HMGXB3Q12766 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
HMGXB3Q12766 OR8S1-201ENST00000310194 1080 ntBASIC31.04■■■□□ 2.56
HMGXB3Q12766 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HMGXB3Q12766 BAD-207ENST00000544785 525 ntTSL 3 BASIC31.04■■■□□ 2.56
HMGXB3Q12766 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HMGXB3Q12766 BSG-214ENST00000614867 960 ntTSL 3 BASIC31.04■■■□□ 2.56
HMGXB3Q12766 TUBB3P1-201ENST00000405796 1332 ntBASIC31.04■■■□□ 2.56
HMGXB3Q12766 BID-204ENST00000399767 2129 ntTSL 2 BASIC31.04■■■□□ 2.56
HMGXB3Q12766 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
HMGXB3Q12766 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
HMGXB3Q12766 RAC2-204ENST00000406508 893 ntTSL 5 BASIC31.03■■■□□ 2.56
HMGXB3Q12766 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
HMGXB3Q12766 SPDYE22P-201ENST00000582158 798 ntBASIC31.03■■■□□ 2.56
HMGXB3Q12766 LINC02560-201ENST00000596379 459 ntBASIC31.03■■■□□ 2.56
HMGXB3Q12766 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC31.03■■■□□ 2.56
HMGXB3Q12766 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
HMGXB3Q12766 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
HMGXB3Q12766 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
HMGXB3Q12766 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC31.03■■■□□ 2.56
HMGXB3Q12766 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
HMGXB3Q12766 AC087163.2-201ENST00000457299 853 ntBASIC31.03■■■□□ 2.56
HMGXB3Q12766 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
HMGXB3Q12766 COX11-202ENST00000571584 1108 ntTSL 2 BASIC31.03■■■□□ 2.56
HMGXB3Q12766 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC31.03■■■□□ 2.56
HMGXB3Q12766 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC31.03■■■□□ 2.56
HMGXB3Q12766 HARS-201ENST00000307633 1780 ntTSL 2 BASIC31.02■■■□□ 2.56
HMGXB3Q12766 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC31.02■■■□□ 2.56
HMGXB3Q12766 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 MIR943-201ENST00000401286 94 ntBASIC31.02■■■□□ 2.56
HMGXB3Q12766 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
HMGXB3Q12766 SPDYE14P-201ENST00000442619 822 ntBASIC31.02■■■□□ 2.56
HMGXB3Q12766 AC002558.1-201ENST00000488906 803 ntBASIC31.02■■■□□ 2.56
HMGXB3Q12766 FAM86C2P-203ENST00000528684 1004 ntBASIC31.02■■■□□ 2.56
HMGXB3Q12766 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC31.02■■■□□ 2.56
HMGXB3Q12766 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
HMGXB3Q12766 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMGXB3Q12766 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC31.01■■■□□ 2.56
HMGXB3Q12766 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
HMGXB3Q12766 PHGDH-209ENST00000641074 1780 ntBASIC31.01■■■□□ 2.56
HMGXB3Q12766 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
HMGXB3Q12766 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
HMGXB3Q12766 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC31.01■■■□□ 2.55
HMGXB3Q12766 SLC25A6P2-201ENST00000497974 877 ntBASIC31.01■■■□□ 2.55
HMGXB3Q12766 AL390754.1-201ENST00000619088 582 ntBASIC31.01■■■□□ 2.55
HMGXB3Q12766 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
HMGXB3Q12766 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
HMGXB3Q12766 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC31.01■■■□□ 2.55
HMGXB3Q12766 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC31.01■■■□□ 2.55
HMGXB3Q12766 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC31.01■■■□□ 2.55
HMGXB3Q12766 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HMGXB3Q12766 FO538757.1-201ENST00000623083 1397 ntBASIC31■■■□□ 2.55
HMGXB3Q12766 USP48-205ENST00000421625 2818 ntTSL 2 BASIC31■■■□□ 2.55
HMGXB3Q12766 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC31■■■□□ 2.55
HMGXB3Q12766 EDF1-203ENST00000371649 790 ntTSL 2 BASIC31■■■□□ 2.55
HMGXB3Q12766 NAA50-208ENST00000497255 789 ntTSL 5 BASIC31■■■□□ 2.55
HMGXB3Q12766 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC31■■■□□ 2.55
HMGXB3Q12766 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC31■■■□□ 2.55
HMGXB3Q12766 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC31■■■□□ 2.55
HMGXB3Q12766 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC31■■■□□ 2.55
HMGXB3Q12766 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HMGXB3Q12766 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC31■■■□□ 2.55
HMGXB3Q12766 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
HMGXB3Q12766 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC31■■■□□ 2.55
HMGXB3Q12766 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
HMGXB3Q12766 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC31■■■□□ 2.55
HMGXB3Q12766 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
HMGXB3Q12766 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
HMGXB3Q12766 TREML5P-201ENST00000421694 576 ntBASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms