Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D3P61077 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UBE2D3P61077 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UBE2D3P61077 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D3P61077 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
UBE2D3P61077 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UBE2D3P61077 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 AC103702.1-201ENST00000548801 2630 ntBASIC12.71□□□□□ -0.37
UBE2D3P61077 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
UBE2D3P61077 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2D3P61077 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D3P61077 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2D3P61077 AC009947.2-201ENST00000444014 672 ntBASIC12.71□□□□□ -0.37
UBE2D3P61077 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 DUTP2-201ENST00000519164 463 ntBASIC12.71□□□□□ -0.37
UBE2D3P61077 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2D3P61077 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2D3P61077 NAPSB-206ENST00000562112 1266 ntBASIC12.71□□□□□ -0.37
UBE2D3P61077 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
UBE2D3P61077 MIR4497-201ENST00000583208 89 ntBASIC12.71□□□□□ -0.37
UBE2D3P61077 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.71□□□□□ -0.37
UBE2D3P61077 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D3P61077 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D3P61077 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.71□□□□□ -0.38
UBE2D3P61077 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D3P61077 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.71□□□□□ -0.38
UBE2D3P61077 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2D3P61077 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 INGX-201ENST00000359239 846 ntBASIC12.7□□□□□ -0.38
UBE2D3P61077 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
UBE2D3P61077 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2D3P61077 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UBE2D3P61077 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 NEK4P2-201ENST00000580004 1012 ntBASIC12.7□□□□□ -0.38
UBE2D3P61077 AC024243.1-201ENST00000609234 778 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms