Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42P60953 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC42P60953 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42P60953 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42P60953 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDC42P60953 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42P60953 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42P60953 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42P60953 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42P60953 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDC42P60953 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42P60953 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42P60953 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CDC42P60953 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42P60953 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42P60953 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDC42P60953 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDC42P60953 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CDC42P60953 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC42P60953 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDC42P60953 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 MESTP1-201ENST00000404287 994 ntBASIC16.3■□□□□ 0.2
CDC42P60953 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.3■□□□□ 0.2
CDC42P60953 SLC25A1P4-201ENST00000567977 778 ntBASIC16.3■□□□□ 0.2
CDC42P60953 MIR3180-4-201ENST00000582223 153 ntBASIC16.3■□□□□ 0.2
CDC42P60953 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42P60953 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC42P60953 DGCR10-201ENST00000609839 495 ntBASIC16.3■□□□□ 0.2
CDC42P60953 AC116407.2-201ENST00000613639 860 ntBASIC16.3■□□□□ 0.2
CDC42P60953 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CDC42P60953 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42P60953 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.3■□□□□ 0.2
CDC42P60953 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDC42P60953 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC42P60953 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42P60953 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42P60953 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42P60953 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42P60953 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDC42P60953 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDC42P60953 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms