Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11AP58511 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 CROCCP2-202ENST00000412962 2773 ntBASIC16.44■□□□□ 0.22
SMIM11AP58511 PCDHA12-202ENST00000613593 2588 ntBASIC16.44■□□□□ 0.22
SMIM11AP58511 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.44■□□□□ 0.22
SMIM11AP58511 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 DDX43P3-201ENST00000441064 443 ntBASIC16.44■□□□□ 0.22
SMIM11AP58511 GCSHP5-201ENST00000443090 522 ntBASIC16.44■□□□□ 0.22
SMIM11AP58511 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 MIR4785-201ENST00000585005 73 ntBASIC16.44■□□□□ 0.22
SMIM11AP58511 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 LINC00167-201ENST00000530583 1419 ntBASIC16.44■□□□□ 0.22
SMIM11AP58511 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11AP58511 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
SMIM11AP58511 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM11AP58511 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMIM11AP58511 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SMIM11AP58511 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.43■□□□□ 0.22
SMIM11AP58511 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM11AP58511 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM11AP58511 AC128688.1-201ENST00000487626 519 ntBASIC16.43■□□□□ 0.22
SMIM11AP58511 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM11AP58511 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM11AP58511 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.43■□□□□ 0.22
SMIM11AP58511 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11AP58511 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11AP58511 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.42■□□□□ 0.22
SMIM11AP58511 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SMIM11AP58511 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SMIM11AP58511 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM11AP58511 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SMIM11AP58511 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SMIM11AP58511 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11AP58511 TSPY14P-201ENST00000303979 915 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms