Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH11P55287 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CDH11P55287 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 AL023806.1-201ENST00000603994 1649 ntBASIC16.35■□□□□ 0.21
CDH11P55287 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH11P55287 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 FAM8A6P-201ENST00000407496 1135 ntBASIC16.35■□□□□ 0.21
CDH11P55287 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH11P55287 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH11P55287 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CDH11P55287 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
CDH11P55287 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH11P55287 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH11P55287 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH11P55287 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH11P55287 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH11P55287 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH11P55287 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CDH11P55287 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH11P55287 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH11P55287 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH11P55287 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH11P55287 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH11P55287 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH11P55287 MIR3180-5-201ENST00000583743 153 ntBASIC16.34■□□□□ 0.21
CDH11P55287 AC011558.1-201ENST00000623459 338 ntBASIC16.34■□□□□ 0.21
CDH11P55287 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH11P55287 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH11P55287 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH11P55287 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH11P55287 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.34■□□□□ 0.21
CDH11P55287 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CDH11P55287 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH11P55287 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH11P55287 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH11P55287 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH11P55287 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH11P55287 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH11P55287 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH11P55287 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH11P55287 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH11P55287 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CDH11P55287 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.33■□□□□ 0.2
CDH11P55287 AC009947.2-201ENST00000444014 672 ntBASIC16.33■□□□□ 0.2
CDH11P55287 HOMER2P1-201ENST00000455653 964 ntBASIC16.33■□□□□ 0.2
CDH11P55287 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH11P55287 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH11P55287 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH11P55287 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH11P55287 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH11P55287 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH11P55287 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms