Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CACNB3P54284 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CACNB3P54284 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CACNB3P54284 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.02■□□□□ 0.96
CACNB3P54284 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.02■□□□□ 0.96
CACNB3P54284 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.02■□□□□ 0.96
CACNB3P54284 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.02■□□□□ 0.96
CACNB3P54284 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.02■□□□□ 0.96
CACNB3P54284 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CACNB3P54284 AC019129.2-201ENST00000609837 1235 ntBASIC21.02■□□□□ 0.96
CACNB3P54284 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.02■□□□□ 0.96
CACNB3P54284 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CACNB3P54284 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNB3P54284 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CACNB3P54284 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CACNB3P54284 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.02■□□□□ 0.95
CACNB3P54284 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.01■□□□□ 0.95
CACNB3P54284 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CACNB3P54284 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.01■□□□□ 0.95
CACNB3P54284 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.01■□□□□ 0.95
CACNB3P54284 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNB3P54284 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNB3P54284 AC018845.2-201ENST00000568326 409 ntBASIC21.01■□□□□ 0.95
CACNB3P54284 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNB3P54284 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.01■□□□□ 0.95
CACNB3P54284 PGM5P2-202ENST00000637225 1043 ntBASIC21.01■□□□□ 0.95
CACNB3P54284 AC092865.6-201ENST00000642101 219 ntBASIC21.01■□□□□ 0.95
CACNB3P54284 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNB3P54284 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CACNB3P54284 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 AC009949.1-201ENST00000623048 1830 ntBASIC21.01■□□□□ 0.95
CACNB3P54284 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CACNB3P54284 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CACNB3P54284 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNB3P54284 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CACNB3P54284 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNB3P54284 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNB3P54284 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNB3P54284 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21■□□□□ 0.95
CACNB3P54284 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21■□□□□ 0.95
CACNB3P54284 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21■□□□□ 0.95
CACNB3P54284 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21■□□□□ 0.95
CACNB3P54284 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21■□□□□ 0.95
CACNB3P54284 AC108073.2-201ENST00000464002 357 ntBASIC21■□□□□ 0.95
CACNB3P54284 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21■□□□□ 0.95
CACNB3P54284 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21■□□□□ 0.95
CACNB3P54284 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21■□□□□ 0.95
CACNB3P54284 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21■□□□□ 0.95
CACNB3P54284 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21■□□□□ 0.95
CACNB3P54284 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21■□□□□ 0.95
CACNB3P54284 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21■□□□□ 0.95
CACNB3P54284 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21■□□□□ 0.95
CACNB3P54284 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNB3P54284 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNB3P54284 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNB3P54284 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.99■□□□□ 0.95
CACNB3P54284 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNB3P54284 KLF4P1-201ENST00000412782 1185 ntBASIC20.99■□□□□ 0.95
CACNB3P54284 PMS2P2-201ENST00000425039 1128 ntBASIC20.99■□□□□ 0.95
CACNB3P54284 DNAJB3-202ENST00000449667 1266 ntBASIC20.99■□□□□ 0.95
CACNB3P54284 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.99■□□□□ 0.95
CACNB3P54284 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms