Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PMS1P54277 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS1P54277 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS1P54277 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.6■□□□□ 0.73
PMS1P54277 DDX43P3-201ENST00000441064 443 ntBASIC19.6■□□□□ 0.73
PMS1P54277 AC063952.2-201ENST00000498792 1227 ntBASIC19.6■□□□□ 0.73
PMS1P54277 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.6■□□□□ 0.73
PMS1P54277 RN7SL850P-201ENST00000579959 291 ntBASIC19.6■□□□□ 0.73
PMS1P54277 GPR32P1-201ENST00000601788 811 ntBASIC19.6■□□□□ 0.73
PMS1P54277 AL390719.2-201ENST00000606993 987 ntBASIC19.6■□□□□ 0.73
PMS1P54277 AL023806.1-201ENST00000603994 1649 ntBASIC19.6■□□□□ 0.73
PMS1P54277 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS1P54277 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS1P54277 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PMS1P54277 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PMS1P54277 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS1P54277 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.59■□□□□ 0.73
PMS1P54277 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.59■□□□□ 0.73
PMS1P54277 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PMS1P54277 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PMS1P54277 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PMS1P54277 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PMS1P54277 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.59■□□□□ 0.73
PMS1P54277 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.59■□□□□ 0.73
PMS1P54277 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PMS1P54277 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 AC116407.2-201ENST00000613639 860 ntBASIC19.59■□□□□ 0.73
PMS1P54277 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.59■□□□□ 0.73
PMS1P54277 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS1P54277 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PMS1P54277 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PMS1P54277 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PMS1P54277 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PMS1P54277 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.58■□□□□ 0.73
PMS1P54277 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PMS1P54277 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PMS1P54277 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.58■□□□□ 0.72
PMS1P54277 MTCL1P1-201ENST00000446207 792 ntBASIC19.58■□□□□ 0.72
PMS1P54277 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.58■□□□□ 0.72
PMS1P54277 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.58■□□□□ 0.72
PMS1P54277 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PMS1P54277 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PMS1P54277 AC009053.2-201ENST00000563701 2365 ntBASIC19.58■□□□□ 0.72
PMS1P54277 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.58■□□□□ 0.72
PMS1P54277 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PMS1P54277 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PMS1P54277 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PMS1P54277 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PMS1P54277 Z83836.1-201ENST00000624605 1642 ntBASIC19.58■□□□□ 0.72
PMS1P54277 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.58■□□□□ 0.72
PMS1P54277 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS1P54277 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.57■□□□□ 0.72
PMS1P54277 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms