Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC25.3■■□□□ 1.64
CLTCL1P53675 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC25.3■■□□□ 1.64
CLTCL1P53675 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC25.3■■□□□ 1.64
CLTCL1P53675 AL138781.2-201ENST00000617896 1843 ntBASIC25.3■■□□□ 1.64
CLTCL1P53675 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CLTCL1P53675 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CLTCL1P53675 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 AP002414.1-201ENST00000391405 1147 ntBASIC25.3■■□□□ 1.64
CLTCL1P53675 AC211486.1-202ENST00000416371 468 ntBASIC25.3■■□□□ 1.64
CLTCL1P53675 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.3■■□□□ 1.64
CLTCL1P53675 HTR5BP-201ENST00000430851 1154 ntBASIC25.3■■□□□ 1.64
CLTCL1P53675 AC211476.1-201ENST00000503899 468 ntBASIC25.3■■□□□ 1.64
CLTCL1P53675 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.3■■□□□ 1.64
CLTCL1P53675 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
CLTCL1P53675 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC25.3■■□□□ 1.64
CLTCL1P53675 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLTCL1P53675 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLTCL1P53675 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC25.29■■□□□ 1.64
CLTCL1P53675 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLTCL1P53675 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC25.29■■□□□ 1.64
CLTCL1P53675 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLTCL1P53675 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLTCL1P53675 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLTCL1P53675 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC25.29■■□□□ 1.64
CLTCL1P53675 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CLTCL1P53675 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC25.29■■□□□ 1.64
CLTCL1P53675 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC25.29■■□□□ 1.64
CLTCL1P53675 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLTCL1P53675 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC25.29■■□□□ 1.64
CLTCL1P53675 REXO1L11P-201ENST00000620964 1927 ntBASIC25.28■■□□□ 1.64
CLTCL1P53675 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC25.28■■□□□ 1.64
CLTCL1P53675 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.28■■□□□ 1.64
CLTCL1P53675 METTL21AP1-201ENST00000438852 635 ntBASIC25.28■■□□□ 1.64
CLTCL1P53675 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.28■■□□□ 1.64
CLTCL1P53675 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC25.28■■□□□ 1.64
CLTCL1P53675 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC25.28■■□□□ 1.64
CLTCL1P53675 AC116407.2-201ENST00000613639 860 ntBASIC25.28■■□□□ 1.64
CLTCL1P53675 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CLTCL1P53675 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC25.28■■□□□ 1.64
CLTCL1P53675 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLTCL1P53675 AL020996.1-203ENST00000536896 2307 ntBASIC25.27■■□□□ 1.64
CLTCL1P53675 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 VN2R19P-201ENST00000442399 1052 ntBASIC25.27■■□□□ 1.64
CLTCL1P53675 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.27■■□□□ 1.64
CLTCL1P53675 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC25.27■■□□□ 1.64
CLTCL1P53675 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CLTCL1P53675 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CLTCL1P53675 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLTCL1P53675 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CLTCL1P53675 LINC00982-205ENST00000420957 435 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC25.26■■□□□ 1.63
CLTCL1P53675 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC25.26■■□□□ 1.63
CLTCL1P53675 PRSS29P-201ENST00000440800 595 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CLTCL1P53675 PC-214ENST00000628663 1470 ntTSL 5 BASIC25.26■■□□□ 1.63
CLTCL1P53675 HLA-DQB1-201ENST00000374943 1656 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 AL590787.1-201ENST00000568856 1315 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC25.26■■□□□ 1.63
CLTCL1P53675 AC097637.2-201ENST00000624096 1997 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CLTCL1P53675 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms